This article presents results of the analysis of 3 sediment cores taken from the bottom of Pomeranian Bay, southern Baltic Sea. These results are part of a larger project that aims to determine the characteristics and rate of the Atlantic marine ingression in the Pomeranian Bay area. The main geochemical elements and diatom assemblages from the cores were identified, revealing lacustrine sediments deposited during the time of Ancylus Lake and marine sediments deposited during the Littorina transgression. Distinct changes in the geochemical composition and diatom assemblages suggest that the Littorina transgression had a very large impact on the environment of Pomeranian Bay.