Operational load monitoring (OLM) is an industrial process related to structural health monitoring, where fatigue of the structure is tracked. Artificial intelligence methods, such as artificial neural networks (ANNs) or Gaussian processes, are utilized to improve efficiency of such processes. This paper focuses on moving such processes towards green computing by deploying and executing the algorithm on low-power consumption FPGA where high-throughput and truly parallel computations can be performed. In the following paper, the OLM process of typical aerostructure (hat-stiffened composite panel) is performed using ANN. The ANN was trained using numerically generated data, of every possible load case, to be working with sensor measurements as inputs. The trained ANN was deployed to Xilinx Artix-7 A100T FPGA of a real-time microcontroller. By executing the ANN on FPGA (where every neuron of a given layer can be processed at the same time, without limiting the number of parallel threads), computation time could be reduced by 70% as compared to standard CPU execution. Series of real-time experiments were performed that have proven the efficiency and high accuracy of the developed FPGA-based algorithm. Adjusting the ANN algorithm to FPGA requirements takes some effort, however it can lead to high performance increase. FPGA has the advantages of many more potential parallel threads than a standard CPU and much lower consumption than a GPU. This is particularly important taking into account potential embedded and remote applications, such as widely performed monitoring of airplane structures.