A total of 15 isolates of B. tulipae collected from home grown tulips without chemical protection and two commercial tulip plantations were examined by RAPD fingerprint analysis. The first tulip plantation was protected by bulb treatment and foliage spraying with fungicides in the growing period and the second plantation – only by the application of fungicides in the growing period. In the previous study, a set of isolates obtained from a plantation with an extensive use of fungicides demonstrated a higher pathogenicity level measured by the inhibition of plant growth, the percentage of bulb and root necrosis in flower pot tests on forced tulips, and by the necrosis size in tests on leaf disks. The relationships between the groups and among isolates were determined by cluster analysis of mean character differences using UPGMA and NJ methods. Similarity index values ranged from 0.872 to 1; on average, the index value was 0.933. A mean similarity of genotypes indicated the highest genotype uniformity of isolates obtained from a plantation with the extensive use of fungicides. 3 groups of clusters, could be observed in the obtained dendrograms. The first cluster contains exclusively genotypes of isolates obtained from a plantation with an extensive use of fungicides, the second one only genotypes of isolates obtained from a plantation protected only by the application of fungicides in the growing period and the third – one genotype of previous group of isolates and four genotypes of isolates obtained from home grown tulips without chemical protection. The most distinct differentiation between the groups of isolates was observed by the amplification using primers G4, H20 and J13. The results of this study revealed genetic similarity between isolates which were obtained from chemically protected plantations and demonstrated a higher degree of pathogenicity in comparison to the isolates which were obtained from unprotected plants and showed a lower degree of pathogenicity.
Phytophthora cambivora was isolated from the bark lesions of two 10- and 15-year-old of analysed alder trees. Additionally, Botrytis cinerea, 3 Fusarium species, Mucor spp., P. alni and Trichoderma spp. were recovered from diseased tissues. Isolates of P. cambivora from six plant species, used for inoculation of alder seedlings and plant parts, cause dthe development of necrosis. Isolate from Chamaecyparis lawsoniana was the weakest pathogen whereas those from Abies alba, Acer pennsylvanicum and Alnus glutinosa were the strongest.
Mycoherbicides are special biotechnology products which contain fungi or fungal metabolites as nonchemical alternatives thereby reducing the input of harmful chemicals to control noxious weeds. The present communication emphasizes on the potential of an indigenous isolate of Alternaria alternata ITCC 4896 as a mycoherbicide for the global weed – Parthenium hysterophorus. Of the various spore concentrations tested by in vitro Detached Leaf Bioassay, 1x106 spores/ml was the most effective inducing 89.2% leaf area damage on the 7th day and was further tested by Whole Plant Bioassay. Both in vitro Detached Leaf Bioassay and Whole Plant Bioassay exhibited a similar trend in disease development showing 50% damage at 96 hours post treatment. However, 100% mortality was observed in the Whole Plant Bioassay on the 7th day. This is the very first report on the bioweedicidal potential of A. alternata ITCC 4896 (LC#508) for use as a mycoherbicide for P. hysterophorus.
Ash dieback, caused by Hymenoscyphus fraxineus, is a serious disease of common and
narrow-leaved ash in Europe. The resistance of individual trees seems to be important for
the maintenance of ash in European forests. In this in situ wound inoculation study, the
susceptibility and differences in resistance to H. fraxineus between Fraxinus excelsior and
F. angustifolia clones were assessed. Neither of the tested clones revealed total resistance
to ash dieback; variety between the tested clones was observed. Differences in necroses
lengths were significant between clones and between two ash species. Longer necroses were
formed in F. angustifolia than in F. excelsior. Some clones exhibiting some resistance to the
pathogen were identified.
Potato leaf blight disease caused by Ulocladium atrum (Syn. Stemphylium atrum) is an important and epidemic disease in potato-growing regions of Iran. In this study, 30 isolates of the disease were collected from the main potato-growing regions of Iran and were analyzed on the basis of morphological characterization and pathogenicity. Based on morphological characteristics, all isolates were identified as U. atrum. Pathogenicity studies indicated that all 30 isolates were pathogenic on potato “Agria” to varying degrees. Five U. atrum isolates causing potato leaf blight disease, obtained from the Plant Pathology Laboratory, Isfahan Research Center for Agriculture and Natural Resources, Isfahan, Iran, were also examined in this study. A total of 35 isolates were genetically analyzed using random amplified polymorphic DNA (RAPD) and inter-simple sequence repeats (ISSR) markers. Cluster analysis using the un-weighted pair group method with the arithmetic average (UPGMA) method for RAPD marker revealed no clear grouping of the isolates obtained from different geographical regions. The groupings, based on morphological characteristics, virulence variability and RAPD analysis, were not correlated. Cluster analysis using Jaccard’s coefficient for ISSR divided the U. atrum isolates into four main groups, in which there was no significant correlation between the isolate groupings regarding their geographic location and pathogenicity. Using molecular techniques genetic variability was detected among the accessions, with cophenetic correlation coefficients (CCC) of 0.80 for RAPDs and 0.89 for ISSRs. The RAPD and ISSR marker results corresponded well, with a correlation of 0.55.
The article presents the research into hygienizing process of chicken manure using calcium peroxide (CaO2) as an environmentally friendly biological deactivation agent. The influence of the addition of CaO2 to chicken manure on the bioavailability of phosphorus was also analyzed. The process of biological deactivation using CaO2, CaO and Ca(OH)2 agents was analyzed applying the disk diffusion method. To optimize the effect of the hygienizing parameters, (CaO2 concentration, pH, temperature and time) on the reduction of Enterobacteriaceae count the Taguchi method was applied. The content of bioavailable phosphorus was measured with the Egner-Riehm method and determined with spectrophotometry. The reduction in bacterial count followed an increase in the concentration of CaO2 in a sample. The optimal experimental conditions (CaO2=10.5 wt.%, pH=9.5, T=40°C, t=180 h) enabled a significant decrease in the Enterobacteriaceae count, from 107 cfu/g to 102 cfu/g. Analysis of the samples with Egner-Riehm method showed that the phosphorus content decreased with the addition of biocide CaO2: from 26.6 mg/l (for 3.5 wt.%) to 3.5 mg/l (for 10.5 wt.%). These values were slightly higher than the content of phosphorus deactivated with Ca(OH)2 i.e., from 11.25 mg/l (for 3.5 wt.%) to 4.49 mg/l (for 10.5 wt.%). The application of CaO2 for hygienizing chicken manure enables effective reduction of Enterobacteriaceae count to an acceptable level (below 1000 cfu/g). In comparison with the traditional techniques of hygienization, the application of CaO2 has a positive effect on the recovery of bioavailable phosphorus.
Hass avocado cultivation in Colombia has grown rapidly in area in recent years. It is being planted in marginal areas, which leads to low yields, and in many cases is related to diseases. Ecological niche modeling (ENM) can offer a view of the potential geographic and environmental distribution of diseases, and thus identify areas with suitable or unsuitable conditions for their development. The aim of the study was to assess current and potential distribution of the major diseases on Hass avocado in Colombia. Areas planted with Hass avocado in Antioquia, Colombia were sampled for diseases including the following pathogens: Phytophthora cinnamomi, Verticillium sp., Lasiodiplodia theobromae, Phytophthora palmivora, Colletotrichum gloeosporioides sensu lato, Pestalotia sp., and Capnodium sp., and one disorder hypoxia-anoxia. These pathogens were selected based on their relevance (incidence-severity) and capacity to cause damage in different tissues of avocado plants. Severity and incidence of each disease were related to environmental information from vegetation indices and topographic variables using maximum entropy modeling approaches (MaxEnt). Models were calibrated only across areas sampled, and then transferred more broadly to areas currently planted, and to potential zones for planting. Combinations of best performance and low omission rates were the basis for model selection. Results show that Hass avocado has been planted in areas highly conducive for many pathogens, particularly for Phytophthora cinnamomi and hypoxia-anoxia disorder. Ecological niche modeling approaches offer an alternative toolset for planning and making assessments that can be incorporated into disease management plans.
Duck viral hepatitis (DVH) is an acute and fatal disease of young ducklings characterized by rapid transmission and damages. The most important agent of DVH is duck hepatitis virus 1 (DHV-1). The effective control of DVH was achieved by active immunization of 1-day-old duck- lings with an attenuated DHV-1 virus vaccine. However, the attenuated virus might reverse to virulence. In this study, a DHV-1 strain, Du/CH/LBJ/090809, was identified and its genomic se- quences were determined. The genome of Du/CH/LBJ/090809 is composed of 7,692 nt excluding poly A and the virus was clustered into genotype A by comparing with other referenced DHV-1 strains. Du/CH/LBJ/090809 could lead to 30% mortality of 10-day-old specific pathogen free (SPF) ducklings. The virus was passaged serially in SPF chicken embryonated eggs and three vi- ruses, passage 16 (P16), P29 and P40, were selected for genomic analysis. P29 and P40 were used to evaluate the attenuation in duckling by inoculating the virus to 10-day-old SPF ducklings. Re- sults of vaccination-challenge assay showed that the inactivated virus P40 could evoke protection against the pathogenic parent virus. Nucleotide and amino acid sequences of the genomes of Du/ CH/LBJ/090809, P16, P29 and P40 were compared. Changes both in nucleotides and amino acids, which might be contributed to the decreasing in virulence by chicken embryo-passaging of DHV- 1, were observed. We speculated that these changes might be important in the adaption and at- tenuation of the virulent virus. Additionally, strains obtained in this study will provide potential candidate in the development of vaccines against DHV-1.
Genetically modified Bt cotton (Gossypium hirsutum) leaves with typical symptoms of Alternaria early blight disease resembling that of tomato and potato were observed in the main cotton growing schemes in Sudan. Symptoms on leaves appeared as either brown 2leaf spot with gray centers or leaf blight with concentric rings. Pathogenicity tests using isolates with both symptoms showed that the isolated fungi were highly pathogenic to both G. hirsutum and G. barbadense cotton varieties. Alternaria alternata isolated from infected tomato and potato leaves with early blight symptoms was included for comparison. Microscopic examination showed that the mean length of conidia from cotton, tomato and potato isolates ranged from 26.25 to 45.45 μm, while the width ranged from 9.56 to 13.64 μm. The mean number of transverse septa among all isolates was 3.4 to 5.7 and the peak length ranged from 3.75 to 7.8 μm. Based on morphological characteristics the two isolates from cotton were identified as A. alternata. Genomic DNA was extracted directly from fungal cultures grown on potato dextrose agar (PDA) plates using a Zymo Research Quick DNA kit. A species-specific primer using the internal transcribed spacer ribosomal DNA (ITS rDNA) PCR scoring indicated the presence of A. alternata using primer pair ITS4/ITS5. Amplifications of the internal transcribed spacer region of 600 bp revealed 100% identity of the isolated fungus from cotton with A. alternata from tomato and potato. These data oblige us to reconsider the presence of A. alternata in the four main cotton growing schemes in Sudan while these symptoms have always been described for tomato and potato early blight disease.