Details
Title
S1 gene based phylogeny of Israel variant-2 infectious bronchitis virus isolated in Turkey in a five year periodJournal title
Polish Journal of Veterinary SciencesYearbook
2022Volume
vol. 25Issue
No 1Affiliation
Müştak, İ.B. : Ankara University, Faculty of Veterinary Medicine, Department of Microbiology, İrfan Baştuğ street, Dışkapı, Ankara, Turkey ; Müştak, H.K. : Ankara University, Faculty of Veterinary Medicine, Department of Microbiology, İrfan Baştuğ street, Dışkapı, Ankara, Turkey ; Bilgen, N. : Ankara University, Faculty of Veterinary Medicine, Department of Genetics, İrfan Baştuğ street, Dışkapı, Ankara, TurkeyAuthors
Keywords
broilers ; genotyping ; infectious bronchitis virus ; molecular epidemiology ; Israel variant 2Divisions of PAS
Nauki Biologiczne i RolniczeCoverage
45-50Publisher
Polish Academy of Sciences Committee of Veterinary Sciences ; University of Warmia and Mazury in OlsztynBibliography
Adzhar A, Shaw K, Britton P, Cavanagh D (1996) Universal oligonucleotides for the detection of infectious bronchitis virus by the polymerase chain reaction. Avian Pathol 25: 817-836.Bande F, Arshad SS, Omar AR, Bejo MH, Abubakar MS, Abba Y (2016) Pathogenesis and Diagnostic Approaches of Avian Infectious Bronchitis. Adv Virol 2016: 4621659.
Belouzard S, Millet JK, Licitra BN, Whittaker GR (2012) Mechanisms of Coronavirus Cell Entry Mediated by the Viral Spike Protein. Viruses 4: 1011-1033.
Bochkov YA, Batchenko GV, Shcherbakova LO, Borisov AV, Drygin VV (2006) Molecular epizootiology of avian infectious bronchitis in Russia. Avian Pathol 35: 379-393.
Cavanagh D (2007) Coronavirus avian infectious bronchitis virus. Vet Res 38: 281-297.
Cavanagh D, Davis PJ, Darbyshire JH, Peters RW (1986) Coronavirus Ibv - Virus Retaining Spike Glycopolypeptide- S2 but Not S1 Is Unable to Induce Virus-Neutralizing or Hemagglutination-Inhibiting Antibody, or Induce Chicken Tracheal Protection. J Gen Virol 67: 1435-1442. Cavanagh D, Mawditt K, Britton P, Naylor CJ (1999) Longitudinal field studies of infectious bronchitis virus and avian pneumovirus in broilers using type-specific polymerase chain reactions. Avian Pathol 28: 593–605.
Cavanagh D, Picault JP, Gough R, Hess M, Mawditt K, Britton P (2005) Variation in the spike protein of the 793/B type of infectious bronchitis virus, in the field and during alternate passage in chickens and embryonated eggs. Avian Pathol 34: 20-25.
Franzo G, Legnardi M, Tucciarone CM, Drigo M, Martini M, Cecchinato M (2019) Evolution of infectious bronchitis virus in the field after homologous vaccination introduction. Vet Res 50: 92.
Habibi M, Karimi V, Langeroudi AG, Ghafouri SA, Hashemzadeh M, Farahani RK, Maghsoudloo H, Abdollahi H, Seifouri P (2017) Combination of H120 and 1/96 avian infectious bronchitis virus vaccine strains protect chickens against challenge with IS/1494/06 (variant 2) - like infectious bronchitis virus. Acta Virol 61: 150-160
He K, Li M, Wei P, Mo ML, Wei TC, Li KR (2012) Complete Genome Sequence of an Infectious Bronchitis Virus Chimera between Cocirculating Heterotypic Strains. J Virol 86: 13887-13888.
Houta MH, Hassan KE, El-Sawah AA, Elkady MF, Kilany WH, Ali A, Abdel-Moneim AS (2021) The emergence, evolution and spread of infectious bronchitis virus genotype GI-23. Arch Virol 166: 9-26.
Ignjatovic J, Galli L (1994) The S1 Glycoprotein but Not the N or M-Protein of Avian Infectious Bronchitis Virus Induces Protection in Vaccinated Chickens. Arch Virol 138: 117-134.
Jackwood MW (2012) Review of infectious bronchitis virus around the world. Avian Dis 56: 634-641.
Jackwood MW, Lee DH (2017) Different evolutionary trajectories of vaccine-controlled and non-controlled avian infectious bronchitis viruses in commercial poultry. Plos One 12(5): e0176709.
Kahya S, Coven F, Temelli S, Eyigor A, Carli KT (2013) Presence of IS/1494/06 genotype-related infectious bronchitis virus in breeder and broiler flocks in Turkey. Ankara Univ Vet Fak Derg 60: 27-31.
Klimcik M, Currie R (2018) Field occurrence of avian infectious bronchitis virus in the Czech Republic and Slovakia. Vet Med-Czech 63: 137-142.
Kumar S, Stecher G, Tamura K (2016) MEGA7: Molecular Evolutionary Genetics Analysis Version 7.0 for Bigger Datasets. Mol Biol Evol 33: 1870-1874.
Ladman BS, Loupos AB, Gelb J Jr (2006) Infectious bronchitis virus S1 gene sequence comparison is a better predictor of challenge of immunity in chickens than serotyping by virus neutralization. Avian Pathol 35: 127-133.
Lai MM, Cavanagh D (1997) The molecular biology of coronaviruses. Adv Virus Res 48: 1-100.
Leghari RA, Fan B, Wang H, Bai J, Zhang L, Abro SH, Jiang P (2016) Full-length genome sequencing analysis of avian infectious bronchitis virus isolate associated with nephropathogenic infection. Poult Sci 95: 2921-2929.
Liu S, Kong X (2004) A new genotype of nephropathogenic infectious bronchitis virus circulating in vaccinated and non-vaccinated flocks in China. Avian Pathol 33: 321-327.
Liu XL, Su JL, Zhao JX, Zhang GZ (2009) Complete genome sequence analysis of a predominant infectious bronchitis virus (IBV) strain in China. Virus Genes 38: 56-65.
Mo M, Huang B, Wei P, Wei T, Chen Q, Wang X, Li M, Fan W (2012) Complete Genome Sequences of Two Chinese Virulent Avian Coronavirus Infectious Bronchitis Virus Variants. J Virol 86: 10903-10904.
Nei M, Kumar S (2000) Molecular evolution and phylogenetics. Oxford University Press, New York.
Ongor H, Timurkaan N, Coven F, Karabulut B, Eroksuz H, Cetinkaya B, Carli T (2021) Detection of Israel variant 2 (IS/1494/06) genotype of Infectious Bronchitis Virus in a layer chicken flock. Ankara Univ Vet Fak Derg 68: 167- 172.
Sjaak De Wit JJ, Cook JK, Van Der Heijden HM (2011) Infectious bronchitis virus variants: a review of the history, current situation and control measures. Avian Pathol 40: 223-235.
Sultan HA, Ali A, El Feil WK, Bazid AH, El-Abideen MA, Kilany WH (2019) Protective efficacy of different live attenuated infectious bronchitis virus vaccination regimes against challenge with IBV variant-2 circulating in the Middle East. Front Vet Sci 6: 341.
Tamura K, Stecher G, Peterson D, Filipski A, Kumar S (2013) MEGA6: molecular evolutionary genetics analysis version 6.0. Mol Biol Evol 30: 2725-2729.
Valastro V, Holmes EC, Britton P, Fusaro A, Jackwood MW, Cattoli G, Monne I (2016) S1 gene-based phylogeny of infectious bronchitis virus: An attempt to harmonize virus classification. Infect Genet Evol 39: 349-364.
Yilmaz H, Altan E, Cizmecigil UY, Gurel A, Ozturk GY, Bamac OE, Aydin O, Britton P, Monne I, Cetinkaya B, Morgan KL, Faburay B, Richt JA, Turan N (2016) Phylogeny and S1 gene variation of infectious bronchitis virus detected in broilers and layers in Turkey. Avian Dis 60: 596-602.