The extremely rapid development of modern techniques for analyzing the human genome, both in the field of scientific research and diagnostic applications, entails a variety of problems whose solution lags far behind our current technological capabilities. These problems appear in the ethical, social, legal or religious spheres and include such detailed issues as e.g. examination of children for diseases manifested in adulthood, accidental (secondary) results being a side effect of the analysis of the whole genome, the growing offer of tests directed directly to the recipient, patenting of genetic information, confidentiality of genetic data and their availability to third parties, availability of genetic counselling, etc. The legal regulation of these problems, the list of which is growing at an alarming rate, still remains in the sphere of declarations, and its shift to the sphere of real actions seems to be lagging further and further back in time. Do patients, laboratory diagnoses, doctors still have to be held hostage by the legislative impotence?
Hladnikia pastinacifolia RCHB., a narrow endemic, has an extremely restricted distribution in Trnovski gozd (Slovenia), despite the presence of many sites with suitable habitats. We compared the morphological traits of plants from different populations and habitats. The overall pattern showed that the smallest plants, with low fruit number, are found on Èaven (locus classicus or type locality); the largest individuals, with high fruit number, grow in the Golobnica gorge. As judged by plant size and seed set, the optimal habitats are screes. We used RAPD markers to estimate genetic variation between and within populations, as well as between and within the northern and the southern parts of the distribution area. Hladnikia showed only a low level of RAPD variability. AMOVA partitioned the majority of genetic diversity within selected populations. The low genetic differentiation between populations and their genetic depauperation indicates survival in situ, since the Trnovski gozd plateau most likely was a nunatak region in the southern Prealps during Pleistocene glaciations. Later range expansion of extant populations was limited by poor seed dispersal. We also analyzed the cpDNA trnL-F intergenic spacer to check whether the sequence is useful for studying the phylogenetic relationships of Hladnikia within the family Apiaceae (Umbelliferae). Our results support the assertion that H. pastinacifolia is an old taxon.
Habitat fragmentation is one of serious threats to biodiversity of nature in today's world. The present study of a typical steppe species Iris pumila L. (Iridaceae) has analyzed the impacts of geographical isolation and population size on genetic diversity and population structure in conditions of habitat fragmentation. The key indices of population genetic variability calculated from the ISSR markers data were on average as follows: Shannon diversity index (S) – 0.188; unbiased Nei’s gene diversity (He) – 0.123; and the average measure of Jaccard’s genetic distances between individuals within populations – 58.4%. Although the largest population had significantly higher values of S and He, the small and marginal populations also showed a comparable level of variation. Most of the genetic variation of I. pumila was distributed within the populations. A strong correlation was found between Nei’s genetic distances and geographic distances between the populations. According to the Bayesian analysis, genetic structure of the populations was highly homogeneous; however, the presence of admixed genotypes indicated the possibility of gene flow between the populations at present.
This article provides an initial analysis, from a historical standpoint, of the problematic nature of conceptualizations of the notion of gene in molecular genetics. The starting point is an historical outline of the relation between classical genetics and molecular genetics; it is indicated how the conceptual baggage of classical genetics influenced the development of the concepts of gene used later in molecular biology. I also reveal two problems of genes in the philosophy of science, i.e., skepticism concerning genes and the concept of nominal gene. I conclude that concept of gene functioning within the framework of molecular genetics should be considered from the point of view of experimentalism and pragmatism. It seems that the concept of gene on the molecular level should be conceptualized—in order to remain functional—as broadly as possible and in relation to genetic material.
Stem canker and black scurf of potato (Solanum tuberosum L.) caused by Rhizoctonia solani Kühn are important and epidemic diseases in potato-growing regions worldwide, including Iran. In this study, 120 isolates were retrieved from infected stem canker from six potato- growing regions in Iran (Isfahan, Ardebil, Fars, Hamedan, Kurdestan and Kerman). Out of these, 30 isolates were selected as representatives for genetic and virulence analysis. The isolates were analyzed by one sequence analyzes of the ITS-rDNA region, random amplified polymorphic DNA (RAPD) and inter-simple sequence repeat (ISSR), as well as virulence studies. Based on sequence analysis of the ITS-rDNA region, all 30 isolates were assigned to the anastomosis group (AG) and all were assigned to AG-3 PT. Cluster analysis using the unweighted pair group method with the arithmetic averages (UPGMA) method for both RAPD and ISSR markers revealed that they were divided into three main groups, with no correlation to geographical regions of the isolates. Pathogenicity tests showed that all isolates were pathogenic on potato cv. Agria; however, virulence variability was observed among the isolates. The grouping based on RAPD analysis and virulence variability was not correlated.
In our study, we estimated the frequency of haplotype for cholesterol deficiency (HCD) carriers in the Russian Holstein cattle population. We studied 1817 random samples of cows born in 2010-2017 from ten herds and 331 cows and heifers from the other three herds born in 2016-2019, fathers or fathers of mothers of which were HCD carriers. The method of AS-PCR was used for animals genotyping. In the first group of animals, the incidence of HCD carriers was 8.09%, and in the second one - 23.26%. Our results demonstrated the necessity to test cows for the carriage of the HCD genetic defect in the Russian population of Holstein cattle.
The frictional resistance coefficient of ventilation of a roadway in a coal mine is a very important technical parameter in the design and renovation of mine ventilation. Calculations based on empirical formulae and field tests to calculate the resistance coefficient have limitations. An inversion method to calculate the mine ventilation resistance coefficient by using a few representative data of air flows and node pressures is proposed in this study. The mathematical model of the inversion method is developed based on the principle of least squares. The measured pressure and the calculated pressure deviation along with the measured flow and the calculated flow deviation are considered while defining the objective function, which also includes the node pressure, the air flow, and the ventilation resistance coefficient range constraints. The ventilation resistance coefficient inversion problem was converted to a nonlinear optimisation problem through the development of the model. A genetic algorithm (GA) was adopted to solve the ventilation resistance coefficient inversion problem. The GA was improved to enhance the global and the local search abilities of the algorithm for the ventilation resistance coefficient inversion problem.
”Bio” technologies are significant for the future prospects and for knowledge based bioeconomy in general. In the article we examine two areas of problems – one connected to the issue of use of genetic resources and traditional knowledge and another – connected to new plant breeding techniques. We examine whether the law is up to date with the developments in the area of biotechnology and if there is a need for legislative changes in these areas. As it turns out, the necessary legislation may be significantly behind the progress of bio-science. Also, we present potential paths for solving such problems.
During laboratory and field experiments on Nacella concinna on the west coast of Admiralty Bay, King George Island (Antarctica) clear morphological and behavioural differences between two limpet forms (N. concinna polaris and N. concinna concinna) were found. They suggested presence of genetic divergence. AFLP (amplified fragment length polymorphism) profiling of N. concinna individuals representing the two forms revealed nearly 32% of polymorphic bands; only 2% of them differed between the forms. Our results suggest that the observed phenotypic variation seems to be a result of adaptation to environ− mental conditions and not of any genetic divergence.
The article presents the most frequent surname in Lithuania — Kazlauskas. Referring to the article “Mysterious Lewandowski” by K. Skowronek (2000), an attempt has been made to account for this frequency in three various ways. First, the principles behind the quantitative structure of anthroponomasticons (Zipf’s law) and the loss of surnames (genetic drift) are discussed. Then the Slavic origin of the surname under consideration has been highlighted as a typical trait of the majority of surnames in Lithuania. In connection with this fact, it has been stressed that caution must be exercised in proposing a thesis on its origin as a translation from Lithuanian on a mass scale, since this thesis requires plentiful empirical evidence. Finally, the etymology of the name is analyzed. Morphologically it is a typical surname derived from a toponym. This supposition is additionally supported by the existence in Poland of numerous localities called Kozłów, Kozłowo or similar name; these in turn are most likely to have been derived from appellative-based personal names of their owners or inhabitants, such as Kozieł.