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| Isolation and characterization of an Antarctic Flavobacterium strain with agarase and alginate lyase activities

Paris Lavín; Atala, Cristian; Gallardo-Cerda, Jorge; Gonzalez-Aravena, Marcelo; Rodrigo De La Iglesia; Rómulo Oses; Torres-Díaz, Cristian; Trefault, Nicole; Molina-Montenegro, Marco A.; H. Dail Laughinghouse IV

Details

Title

Isolation and characterization of an Antarctic Flavobacterium strain with agarase and alginate lyase activities

Journal title

Polish Polar Research

Yearbook

2016

Volume

vol. 37

Issue

No 3

Authors

Paris Lavín ; Atala, Cristian ; Gallardo-Cerda, Jorge ; Gonzalez-Aravena, Marcelo ; Rodrigo De La Iglesia ; Rómulo Oses ; Torres-Díaz, Cristian ; Trefault, Nicole ; Molina-Montenegro, Marco A. ; H. Dail Laughinghouse IV

Keywords

agarase ; alginate-lyase ; Antarctic ; Flavobacterium ; King George Island

Divisions of PAS

Nauki o Ziemi

Coverage

403-419

Publisher

Polish Academy of Sciences ; Committee on Polar Research

Date

2016

Type

Artykuły / Articles

Identifier

DOI: 10.1515/popore-2016-0021 ; ISSN 0138-0338 ; eISSN 2081-8262

Source

Polish Polar Research; 2016; vol. 37; No 3; 403-419

References

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HUANG (2013), Characterization of a new alginate lyase from newly isolated Flavobacterium sp and, Journal of Industrial Microbiology Biotechnology, 40, 113, doi.org/10.1007/s10295-012-1210-1 ; SHIN (2010), Global metabolite profiling of agarose degradation by Saccharophagus degradans, New Biotechnology, 27, 156, doi.org/10.1016/j.nbt.2010.02.023 ; STEVENS (1977), Purifi cation and characteristics of an alginase from Alginovibrio aquatilis, Applied and Environmental Microbiology, 33, 1156. ; GEORLETTE (2004), and GERDAY Some like it cold : biocatalysis at low temperatures, FEMS Microbiology Reviews, 28, 25, doi.org/10.1016/j.femsre.2003.07.003 ; EDGAR (2004), MUSCLE : multiple sequence alignment with high accuracy and high throughput, Nucleic Acids Research, 32, 1792, doi.org/10.1093/nar/gkh340 ; HOSODA (2003), Isolation and characterization of agar - degrading Paenibacillus spp associated with the rhizosphere of spinach Bioscience , Biotechnology and, Biochemistry, 67, 1048. ; RATKOWSKY (1983), Model for bacterial culture growth rate throughout the entire biokinetic temperature range, Journal of Bacteriology, 154. ; HEHEMANN (2012), Bacteria of the human gut microbiome catabolize red seaweed glycans with carbohydrate - active enzyme updates from extrinsic microbes Proceedings of the National Academy of, Sciences, 109, 19786. ; PEETERS (2011), The gyrB gene is a useful phylogenetic marker for exploring the diversity of Flavobacterium strains isolated from terrestrial and aquatic habitats in Antarctica, FEMS Microbiology Letters, 321. ; WONG (2000), Alginate lyase : review of major sources and enzyme characteristics structure - function analysis biological roles and applications of, Annual Review Microbiology, 54, 289, doi.org/10.1146/annurev.micro.54.1.289 ; HASEGAWA (1985), Dating of the human - ape splitting by a molecular clock of mitochondrial DNA, Journal of Molecular Biology, 22, 160. ; KIM (2012), Depolymerization of alginate into a monomeric sugar acid using Alg an exo - oligoalginate lyase cloned from Saccharophagus degradans and, Applied Microbiology Biotechnology, 17, 2233, doi.org/10.1007/s00253-012-3882-x ; LOPERENA (2012), Extracellular enzymes produced by microorganisms isolated from maritime Antarctica of and, World Journal Microbiology Biotechnology, 28, 2249, doi.org/10.1007/s11274-012-1032-3 ; HUTCHESON (2011), Carbohydrase systems of Saccharophagus degradans degrading marine complex polysaccharides, Marine Drugs, 9, 645, doi.org/10.3390/md9040645 ; STACH (2010), Antimicrobials : treasures from the ocean, Microbiology Today, 37, 104. ; ALTSCHUL (1990), Basic local alignment search tool, Journal of Molecular Biology, 215. ; OIKAWA (2003), Paradoxical thermostable enzymes from psychrophile : molecular characterization and potentiality for biotechnological application :, Journal of Molecular Catalysis B Enzymatic, 23, 65, doi.org/10.1016/S1381-1177(03)00073-0 ; THOMAS (2011), Environmental and gut bacteroidetes : the food connection in, Frontiers Microbiology, 2, 1, doi.org/10.3389/fmicb.2011.00093 ; HEHEMANN (2010), Transfer of carbohydrate - active enzymes from marine bacteria to Japanese gut microbiota, Nature, 464. ; DELATTRE (2011), Galactans : an overview of their most important sourcing and applications as natural polysaccharides and, Brazilian Archives of Biology Technology, 54, 1075, doi.org/10.1590/S1516-89132011000600002 ; KAZUOKA (2003), Thermostable aspartase from a marine psychrophile Cytophaga molecular characterization and primary structure, Journal of Biochemistry, 133.

Editorial Board

Editorial Advisory Board

Robert BIALIK (Warszawa, Poland)

Magda BŁAŻEWICZ (Łódź, Poland)

Alistair CRAME (Cambridge, UK)

Josef ELSTER (České Budějovice, Czechia)

Jacek JANIA (Sosnowiec, Poland)

Cezary KABAŁA (Wrocław, Poland)

Jerónimo LÓPEZ-MARTINEZ (Madrid, Spain)

Krzysztof MIGAŁA (Wrocław, Poland)

Jerzy NAWROCKI (Warszawa, Poland)

Maria OLECH (Kraków, Poland)

Sergej OLENIN (Klaipeda, Litva)

Sandra PASSCHIER (Montclair, USA)

Jan PAWŁOWSKI (Sopot, Poland)

Żaneta POLKOWSKA (Gdańsk, Poland)

Gerhard SCHMIEDL (Hamburg, Germany)

Peter SCHWEITZER (Vienna, Austria)

Janne SOREIDE (UNIS, Svalbard)

Lech STEMPNIEWICZ (Gdańsk, Poland)

Mateusz STRZELECKI (Wrocław, Poland)

Witold SZCZUCIŃSKI (Poznań, Poland)

Slawek TULACZYK (Santa Cruz, USA)

Jan Marcin WĘSŁAWSKI (Sopot, Poland) - President

Abstracting & Indexing

Abstracting & Indexing

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